Neurosnap Tools
Collection of useful bioinformatic functions and tools for various computational biology pipelines. Primarily designed for working with amino acid sequences and chemical structures.
This a package developed by Keaun Amani at https://neurosnap.ai. You are welcome to use this code and contribute as you see fit. We are currently working on expanding this package as well to add support for more common functions.
Documentation
Contributing
We welcome contributions to this package. If you have a feature that you want to code or have added, submit a pull request or an issue.
# set up a virtualenv
python3.8 -m venv venv
# this step might differ depending on your shell
source venv/bin/activate
pip install --editable .[dev]
Building documentation
To build documentation, enter your virtual environment and run make docs from the root of the repository.
Then, open docs/build/html/index.html in a web browser.
Installation
pip install -U --no-cache-dir git+https://github.com/NeurosnapInc/neurosnap.git
Tutorials
Various interactive jupyter notebooks can be found in the example_notebooks directory of this repository. For additional tutorials check out the Official Neurosnap Blog or join our discord server.